Accounting for Real Estate in San Francisco
REAL ESTATE ACCOUNTING & Advisory in San Francisco
Presti & Naegele’s real estate accounting specialists bring decades of experience delivering practical solutions for the changing cycles of the property industry. In San Francisco, we work with clients who manage a diverse portfolio of real estate assets, including industrial facilities, warehouse spaces, corporate offices, apartment buildings, retail plazas, co-op residences, homeowner associations, and residential communities.
We help San Francisco property owners navigate the complexities of real estate ownership and management with clear, tailored strategies. Real estate has long been a dependable way to build wealth, offering steady growth and portfolio diversification beyond stocks and bonds. Rental income can provide consistent cash flow, while tax advantages like depreciation deductions further enhance returns. From historic Victorians in Pacific Heights to high-rise condominiums in SoMa, our accounting for real estate services are designed for the unique opportunities and challenges of the San Francisco market.{{
CHOOSING THE RIGHT BUSINESS ENTITY FOR San Francisco
REAL ESTATE OWNERSHIP
Presti & Naegele supports San Francisco real estate investors in selecting the right business entity for rental properties. While all investments carry some level of risk, forming a separate legal entity can provide important protection and benefits.
✔ A Limited Liability Company (LLC) combines the simplicity of a sole proprietorship with the liability safeguards of a corporation. It separates personal assets from business liabilities, reduces personal exposure, and provides tax flexibility for those utilizing real estate accounting in San Francisco.
With an LLC, rental income passes directly to your personal tax return, avoiding corporate-level taxes. It also allows you to deduct eligible property expenses, including mortgage interest and maintenance costs. In San Francisco’s competitive real estate market, an LLC signals professionalism to partners and tenants. Many investors choose LLCs for their liability protection, tax adaptability, and ease of management, though S Corps may be a good fit for certain active real estate professionals seeking additional shareholder protections.
Legal Structure:
How real estate owners pay taxes depends on the structure of their business. At P&N, we can evaluate your situation and recommend the right entity for your business.
Sole Proprietorship – A sole proprietorship is the simplest form of business, where the owner and the business are one.
Limited Liability Company (LLC) – An LLC combines the liability protection of a corporation with the flexibility of a partnership.
Partnership – A partnership involves two or more individuals or entities sharing ownership and responsibilities.
S-Corporation – An S-Corporation is a pass-through entity that combines features of
corporations and partnerships.
C-Corporation – A C-Corporation is a separate legal entity owned by shareholders. It’s the most complex structure.
UNDERSTANDING ACCELERATED DEPRECIATION in San Francisco
For San Francisco property owners and investors, our Real Estate CPAs can help clarify how tax rules apply to your holdings. Accelerated depreciation is one approach that can improve your tax position while managing real estate assets.
Depreciation allows property owners to recover the cost basis of a building over time, accounting for physical wear, aging, and functional obsolescence. While residential rental properties typically depreciate over 27.5 years, accelerated depreciation enables San Francisco investors to claim larger deductions in the early years of ownership for greater near-term benefits.
How Does Accelerated Depreciation Work?
A passive activity is an investment or business where the taxpayer does not materially participate during the year. Passive activity losses (PALs) occur when total expenses exceed the income generated by these activities.
In San Francisco, owning rental property often qualifies as a passive activity. Expenses such as mortgage interest, insurance, repairs, and depreciation can contribute to passive losses. Likewise, investments in limited partnerships or other local real estate ventures with minimal active participation are considered passive activities.
Components Subject to Accelerated Depreciation: Certain components—such as appliances, flooring, landscaping, and fencing—may be fully depreciated within the first 5 to 7 years.
Tax Benefits of Accelerated Depreciation
- Reduced Taxable Income: Accelerated depreciation lowers taxable income, resulting in immediate tax savings.
- Cash Flow Boost: By claiming accelerated depreciation, investors free up more cash for other purposes, such as property improvements or scaling their portfolios.
PASSIVE ACTIVITY LOSSES
A passive activity is an investment or business where the taxpayer does not materially participate during the year. Passive activity losses (PALs) occur when total expenses exceed the income generated by these activities.
In San Francisco, owning rental property often qualifies as a passive activity. Expenses such as mortgage interest, insurance, repairs, and depreciation can contribute to passive losses. Likewise, investments in limited partnerships or other local real estate ventures with minimal active participation are considered passive activities.
- Offsetting Income: Passive losses can only offset passive income. In other words, you can use these losses to reduce taxes owed on other passive income sources.
- Limitations: However, there are limitations. If you and your co-owners have passive income from other sources, the losses generated by the rental activity may be used to offset that income.
Exceptions to the passive loss rules include:
- $25,000 Allowance: If you actively manage the real estate and earn less than $100,000 during the year, you can deduct up to $25,000 in passive losses against ordinary income.
- Real Estate Professionals: Real estate professionals who materially participate in their real estate activities are not subject to the same passive loss rules. They can use real estate losses to offset income from other active sources.
Material participation is a key factor. If you actively manage the real estate (e.g., handle day-to-day operations), your losses may not be strictly passive. Real estate professionals who meet specific qualifications can also avoid the passive loss treatment.
1031 EXCHANGE
A 1031 exchange—often referred to as a like-kind exchange—is a valuable tool for seasoned San Francisco investors to defer capital gains taxes when replacing one qualifying investment property with another.
When you sell a San Francisco property held for investment or business purposes and reinvest the proceeds into another qualifying property, you can defer capital gains tax. The funds from the sale must be held by a qualified intermediary and cannot be received directly. The IRS defines “like-kind” broadly, allowing exchanges such as an apartment building for commercial space or a retail storefront for undeveloped land.
You can complete multiple 1031 exchanges over time, letting your San Francisco property portfolio grow tax-deferred. Taxes are owed only when you eventually sell for cash, at the applicable long-term capital gains rate. While this strategy postpones taxes, it doesn’t eliminate them entirely. In some circumstances, even a former primary residence may qualify.
Strategic Advisory for Real Estate Growth in San Francisco
Thrive in the fast-paced San Francisco real estate market with our dedicated real estate accounting services and experienced Real Estate CPAs. We help track market trends, pinpoint promising investment opportunities, and provide guidance to make well-informed decisions. Presti & Naegele is your reliable partner in navigating San Francisco’s complex property market.
STREAMLINE FINANCIAL OPERATIONS WITH QUICKBOOKS EXPERTISE
Organized bookkeeping is key to success in San Francisco real estate. Our QuickBooks services are designed for property owners and investors, making accounting simpler and more efficient. With our assistance, you can focus on expanding your investments while knowing your financial records are precise and up to date.
TRANSFORM YOUR San Francisco REAL ESTATE VENTURES WITH PRESTI & NAEGELE EXPERTISE
Elevate your success - Schedule a consultation with a Real Estate CPA today and unlock the full potential of your property investments.

For inquiries or expert guidance, contact Presti & Naegele Accounting Offices. Your success awaits!
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I have had my business for more than 10 years and struggled through several *truly awful* accountants in the early years. I found Presti & Naegele about five years ago and have never looked back. They are a life-changing breath of fresh air and they will be my accountants for as long as I live. Donald Sager brings me confidence, peace and calm in an area of the business that would otherwise be stressful. He knows what he's doing and is always extremely responsive and ready with a plan of action and to explain anything at all. I am so grateful for him!
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